Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | DWZ36_01550 | Not Available | Negative | 409463 - 410374 | 35700.8 |
| glycosyltransferase | DWZ36_01555 | Not Available | Negative | 410602 - 411501 | 34420.5 |
| hypothetical protein | DWZ36_01560 | Not Available | Negative | 411516 - 412268 | 29433.6 |
| glycosyltransferase family 2 protein | DWZ36_01565 | Not Available | Negative | 412284 - 413000 | 27429.8 |
| udp-galactopyranose mutase | DWZ36_01570 | Not Available | Negative | 413084 - 414190 | 42826.5 |
| acetyltransferase | DWZ36_01575 | Not Available | Negative | 414193 - 415116 | 37581.7 |
| glycosyltransferase family 9 protein | DWZ36_01580 | Not Available | Negative | 415117 - 416148 | 38676.3 |
| 4-phosphoerythronate dehydrogenase pdxb | DWZ36_01585 | Not Available | Positive | 416253 - 417278 | 38267.8 |
| duf4249 domain-containing protein | DWZ36_01590 | Not Available | Negative | 417443 - 418408 | 36343.1 |
| tonb-dependent receptor | DWZ36_01595 | Not Available | Negative | 418415 - 421069 | 100776.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

