Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4861 domain-containing protein | DWZ36_15975 | Not Available | Negative | 3789748 - 3790962 | 45677.1 |
| glycoside hydrolase family 28 protein | DWZ36_15980 | Not Available | Negative | 3791101 - 3792720 | 59146.7 |
| enoyl-acp reductase | DWZ36_15985 | Not Available | Positive | 3793097 - 3793954 | 31326.5 |
| gliding motility lipoprotein gldb | DWZ36_15990 | Not Available | Positive | 3793962 - 3794963 | 38905.2 |
| sam-dependent methyltransferase | DWZ36_15995 | Not Available | Positive | 3794987 - 3795691 | 26022.9 |
| hypothetical protein | DWZ36_16000 | Not Available | Negative | 3795707 - 3796696 | 37752.0 |
| lipoyl synthase | DWZ36_16005 | Not Available | Negative | 3796754 - 3797608 | 31727.3 |
| s9 family peptidase | DWZ36_16010 | Not Available | Negative | 3797707 - 3799908 | 83302.8 |
| tigr01212 family radical sam protein | DWZ36_16015 | Not Available | Positive | 3799995 - 3800921 | 35509.8 |
| fpra family a-type flavoprotein | DWZ36_16020 | Not Available | Positive | 3800937 - 3802124 | 44710.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

