Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | DWZ36_15770 | Not Available | Negative | 3733507 - 3734208 | 26605.4 |
| glutamine synthetase type iii | DWZ36_15775 | Not Available | Negative | 3734369 - 3736558 | 82847.0 |
| hypothetical protein | DWZ36_15780 | Not Available | Positive | 3736734 - 3738932 | 86208.9 |
| tolc family protein | DWZ36_15785 | Not Available | Positive | 3738995 - 3740428 | 53881.0 |
| biotin/lipoyl-binding protein | DWZ36_15790 | Not Available | Positive | 3740446 - 3741441 | 36927.8 |
| abc transporter permease | DWZ36_15795 | Not Available | Positive | 3741502 - 3742674 | 43620.6 |
| abc transporter permease | DWZ36_15800 | Not Available | Positive | 3742658 - 3743848 | 44503.8 |
| hypothetical protein | DWZ36_15805 | Not Available | Positive | 3744576 - 3744836 | 9993.49 |
| hypothetical protein | DWZ36_15810 | Not Available | Negative | 3745023 - 3745976 | 38550.4 |
| gntr family transcriptional regulator | DWZ36_15815 | Not Available | Negative | 3746100 - 3746933 | 31856.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

