Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase p family protein | DWZ36_15720 | Not Available | Positive | 3723612 - 3724772 | 42418.8 |
| glutamine-hydrolyzing gmp synthase | DWZ36_15725 | Not Available | Negative | 3724929 - 3726236 | 48297.4 |
| gmp synthase (glutamine-hydrolyzing) | DWZ36_15730 | Not Available | Negative | 3726275 - 3727828 | 57645.2 |
| large conductance mechanosensitive channel protein mscl | DWZ36_15735 | Not Available | Negative | 3728067 - 3728507 | 15733.6 |
| type i glyceraldehyde-3-phosphate dehydrogenase | DWZ36_15740 | Not Available | Positive | 3728659 - 3729669 | 35961.1 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DWZ36_15745 | Not Available | Positive | 3729791 - 3730714 | 35776.2 |
| yegs/rv2252/bmru family lipid kinase | DWZ36_15750 | Not Available | Positive | 3730720 - 3731649 | 35331.0 |
| 3-deoxy-8-phosphooctulonate synthase | DWZ36_15755 | Not Available | Positive | 3731722 - 3732519 | 28835.3 |
| ferritin | DWZ36_15760 | Not Available | Negative | 3732680 - 3733192 | 19740.4 |
| ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperone | DWZ36_15765 | Not Available | Negative | 3733225 - 3733377 | 5511.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

