Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase | DWZ36_15570 | Not Available | Positive | 3690028 - 3691554 | 57773.4 |
| abc transporter atp-binding protein | DWZ36_15575 | Not Available | Positive | 3691811 - 3693403 | 59512.0 |
| glycoside hydrolase family 3 protein | DWZ36_15580 | Not Available | Negative | 3693493 - 3696087 | 96058.1 |
| acetyl-coa hydrolase/transferase family protein | DWZ36_15585 | Not Available | Negative | 3696273 - 3697766 | 54010.7 |
| hypothetical protein | DWZ36_15590 | Not Available | Negative | 3697804 - 3698154 | 13516.5 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | DWZ36_15595 | Not Available | Positive | 3698492 - 3699862 | 51936.9 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DWZ36_15600 | Not Available | Positive | 3699862 - 3700263 | 15118.3 |
| pspc domain-containing protein | DWZ36_15605 | Not Available | Negative | 3700273 - 3700509 | 9155.18 |
| class i sam-dependent methyltransferase | DWZ36_15610 | Not Available | Positive | 3700677 - 3701543 | 33272.9 |
| abc transporter permease | DWZ36_15615 | Not Available | Positive | 3701546 - 3702415 | 32622.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

