Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | DWZ36_15335 | Not Available | Positive | 3614647 - 3615426 | 28812.0 |
| cupin domain-containing protein | DWZ36_15340 | Not Available | Positive | 3615460 - 3615924 | 16922.2 |
| radical sam mobile pair protein a | DWZ36_15345 | Not Available | Positive | 3615948 - 3616616 | 26048.5 |
| radical sam mobile pair protein b | DWZ36_15350 | Not Available | Positive | 3616613 - 3617488 | 33883.9 |
| glycoside hydrolase family 95 protein | DWZ36_15355 | Not Available | Negative | 3618292 - 3620778 | 92733.5 |
| glycosyl hydrolase | DWZ36_15360 | Not Available | Negative | 3620782 - 3622443 | 62599.9 |
| hypothetical protein | DWZ36_15365 | Not Available | Negative | 3622472 - 3622663 | 7356.05 |
| hypothetical protein | DWZ36_15370 | Not Available | Negative | 3622791 - 3623222 | 16693.8 |
| duf5009 domain-containing protein | DWZ36_15375 | Not Available | Negative | 3623224 - 3624303 | 41919.9 |
| right-handed parallel beta-helix repeat-containing protein | DWZ36_15380 | Not Available | Negative | 3624320 - 3626119 | 67717.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

