Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_15285 | Not Available | Negative | 3600355 - 3600981 | 24334.1 |
| alanine:cation symporter family protein | DWZ36_15290 | Not Available | Negative | 3601115 - 3602515 | 51044.3 |
| atp-binding protein | DWZ36_15295 | Not Available | Negative | 3602521 - 3603168 | 24812.1 |
| helix-turn-helix domain-containing protein | DWZ36_15300 | Not Available | Positive | 3603301 - 3607260 | 149448.0 |
| n-acetyltransferase | DWZ36_15305 | Not Available | Positive | 3607410 - 3607688 | 10514.7 |
| serine dehydratase subunit alpha family protein | DWZ36_15310 | Not Available | Negative | 3607763 - 3609058 | 46076.9 |
| thiol:disulfide interchange protein | DWZ36_15315 | Not Available | Negative | 3609250 - 3611283 | 74735.8 |
| arac family transcriptional regulator | DWZ36_15320 | Not Available | Negative | 3611416 - 3613167 | 68507.7 |
| Trna-ser | Not Available | Not Available | Positive | 3613300 - 3613387 | Not Available |
| arac family transcriptional regulator | DWZ36_15330 | Not Available | Negative | 3613611 - 3614510 | 35843.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

