Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DWZ36_15235 | Not Available | Positive | 3594358 - 3594616 | 9873.67 |
| hypothetical protein | DWZ36_15240 | Not Available | Negative | 3594769 - 3595569 | 30042.9 |
| ribonuclease y | DWZ36_15245 | Not Available | Negative | 3595761 - 3597296 | 57327.7 |
| cell division protein zapa | DWZ36_15250 | Not Available | Negative | 3597397 - 3597690 | 11772.0 |
| hypothetical protein | DWZ36_15255 | Not Available | Negative | 3597720 - 3598013 | 11779.2 |
| duf454 domain-containing protein | DWZ36_15260 | Not Available | Negative | 3598186 - 3598548 | 14082.9 |
| 6-carboxytetrahydropterin synthase qued | DWZ36_15265 | Not Available | Positive | 3598683 - 3599015 | 12835.3 |
| radical sam protein | DWZ36_15270 | Not Available | Positive | 3599002 - 3599547 | 20465.4 |
| Trna-trp | Not Available | Not Available | Positive | 3599604 - 3599679 | Not Available |
| uracil-dna glycosylase family protein | DWZ36_15280 | Not Available | Negative | 3599747 - 3600340 | 23030.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

