Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_15035 | Not Available | Negative | 3535009 - 3535227 | 8315.23 |
| endonuclease | DWZ36_15040 | Not Available | Negative | 3535342 - 3536178 | 31401.4 |
| hypothetical protein | DWZ36_15045 | Not Available | Negative | 3536221 - 3537510 | 48123.5 |
| Trna-glu | Not Available | Not Available | Positive | 3537653 - 3537727 | Not Available |
| ahpc/tsa family protein | DWZ36_15055 | Not Available | Negative | 3538076 - 3539257 | 43766.7 |
| starch-binding protein | DWZ36_15060 | Not Available | Negative | 3539276 - 3540697 | 53335.2 |
| susc/raga family tonb-linked outer membrane protein | DWZ36_15065 | Not Available | Negative | 3540709 - 3543957 | 121652.0 |
| arac family transcriptional regulator | DWZ36_15070 | Not Available | Negative | 3544149 - 3545966 | 70484.2 |
| diacylglucosamine hydrolase | DWZ36_15075 | Not Available | Negative | 3545963 - 3546553 | 22791.2 |
| clc family h(+)/cl(-) exchange transporter | DWZ36_15080 | Not Available | Negative | 3546563 - 3548161 | 59620.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

