Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 4-epimerase gale | DWZ36_14935 | Not Available | Positive | 3508077 - 3509111 | 37984.7 |
| lruc domain-containing protein | DWZ36_14940 | Not Available | Positive | 3509405 - 3511282 | 71350.9 |
| yitt family protein | DWZ36_14945 | Not Available | Positive | 3511423 - 3512313 | 32573.4 |
| aspartate ammonia-lyase | DWZ36_14950 | Not Available | Positive | 3512577 - 3514010 | 52251.4 |
| hypothetical protein | DWZ36_14955 | Not Available | Negative | 3513954 - 3514220 | 10125.3 |
| hypothetical protein | DWZ36_14960 | Not Available | Positive | 3514221 - 3514493 | 10560.4 |
| Trna-ser | Not Available | Not Available | Positive | 3514570 - 3514657 | Not Available |
| endonuclease muts2 | DWZ36_14970 | Not Available | Positive | 3514806 - 3517316 | 95377.9 |
| rna polymerase sigma-70 factor | DWZ36_14975 | Not Available | Positive | 3517396 - 3517947 | 21576.8 |
| fecr family protein | DWZ36_14980 | Not Available | Positive | 3518051 - 3519220 | 44561.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

