Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_14735 | Not Available | Positive | 3458693 - 3459496 | 30936.2 |
| glycoside hydrolase family 28 protein | DWZ36_14740 | Not Available | Positive | 3459512 - 3460936 | 52234.0 |
| glycosyl hydrolase family 2 | DWZ36_14745 | Not Available | Positive | 3460953 - 3463715 | 104039.0 |
| hypothetical protein | DWZ36_14750 | Not Available | Negative | 3464070 - 3464192 | 4311.02 |
| isoaspartyl peptidase/l-asparaginase | DWZ36_14755 | Not Available | Negative | 3464667 - 3465653 | 34958.3 |
| l-rhamnose mutarotase | DWZ36_14760 | Not Available | Negative | 3466362 - 3466751 | 15271.5 |
| rok family protein | DWZ36_14765 | Not Available | Negative | 3466751 - 3467722 | 34315.4 |
| abc transporter atp-binding protein | DWZ36_14770 | Not Available | Positive | 3467875 - 3468594 | 26742.3 |
| abc transporter permease | DWZ36_14775 | Not Available | Positive | 3468604 - 3469860 | 46624.0 |
| abc transporter permease | DWZ36_14780 | Not Available | Positive | 3469865 - 3471106 | 45551.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

