Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| precorrin-2 c(20)-methyltransferase | DWZ36_14330 | Not Available | Negative | 3356926 - 3357654 | 27447.2 |
| iron abc transporter substrate-binding protein | DWZ36_14335 | Not Available | Positive | 3357758 - 3358909 | 43289.0 |
| iron abc transporter permease | DWZ36_14340 | Not Available | Positive | 3358921 - 3359958 | 36701.7 |
| abc transporter atp-binding protein | DWZ36_14345 | Not Available | Positive | 3359958 - 3360980 | 37760.9 |
| cobalt-precorrin-5b (c(1))-methyltransferase | DWZ36_14350 | Not Available | Negative | 3361002 - 3362798 | 66024.1 |
| precorrin-4 c(11)-methyltransferase | DWZ36_14355 | Not Available | Negative | 3362824 - 3364635 | 67021.3 |
| bifunctional cobalt-precorrin-7 (c(5))-methyltransferase/cobalt-precorrin-6b (c(15))-methyltransferase | DWZ36_14360 | Not Available | Negative | 3364657 - 3365838 | 44294.9 |
| precorrin-3b c(17)-methyltransferase | DWZ36_14365 | Not Available | Negative | 3365843 - 3367249 | 51753.8 |
| flavin reductase family protein | DWZ36_14370 | Not Available | Negative | 3367907 - 3368467 | 20230.2 |
| flavodoxin | DWZ36_14375 | Not Available | Negative | 3368473 - 3369009 | 19869.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

