Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DWZ36_14230 | Not Available | Positive | 3337673 - 3338950 | 46708.2 |
| dna helicase uvrb | DWZ36_14235 | Not Available | Positive | 3339009 - 3339575 | 21270.7 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | DWZ36_14240 | Not Available | Positive | 3339604 - 3340305 | 26175.7 |
| duf4836 family protein | DWZ36_14245 | Not Available | Positive | 3340310 - 3341842 | 56158.9 |
| atp-binding cassette domain-containing protein | DWZ36_14250 | Not Available | Positive | 3341839 - 3342483 | 24452.5 |
| abc transporter permease | DWZ36_14255 | Not Available | Positive | 3342480 - 3343682 | 44901.3 |
| yjbq family protein | DWZ36_14260 | Not Available | Positive | 3343691 - 3344104 | 15533.7 |
| hypothetical protein | DWZ36_14265 | Not Available | Negative | 3344134 - 3344319 | 7314.11 |
| hypothetical protein | DWZ36_14270 | Not Available | Positive | 3344506 - 3345111 | 23443.9 |
| aldehyde dehydrogenase family protein | DWZ36_14275 | Not Available | Positive | 3345482 - 3348802 | 123986.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

