Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l27 | DWZ36_14125 | Not Available | Negative | 3315457 - 3315720 | 9251.19 |
| 50s ribosomal protein l21 | DWZ36_14130 | Not Available | Negative | 3315742 - 3316059 | 11743.4 |
| had family hydrolase | DWZ36_14135 | Not Available | Negative | 3316273 - 3318342 | 79523.0 |
| nlpc/p60 family protein | DWZ36_14140 | Not Available | Negative | 3318398 - 3318910 | 19417.5 |
| abc transporter atp-binding protein | DWZ36_14145 | Not Available | Negative | 3318907 - 3319614 | 26402.7 |
| hypothetical protein | DWZ36_14150 | Not Available | Negative | 3319627 - 3321114 | 57386.8 |
| insulinase family protein | DWZ36_14155 | Not Available | Negative | 3321124 - 3323943 | 106190.0 |
| thioredoxin-disulfide reductase | DWZ36_14160 | Not Available | Negative | 3323974 - 3324921 | 34019.6 |
| hypothetical protein | DWZ36_14165 | Not Available | Negative | 3324991 - 3325605 | 23005.4 |
| dna translocase ftsk | DWZ36_14170 | Not Available | Negative | 3325622 - 3328087 | 91840.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

