Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidase | DWZ36_14075 | Not Available | Positive | 3304782 - 3306134 | 49852.0 |
| nitroreductase family protein | DWZ36_14080 | Not Available | Positive | 3306147 - 3306776 | 23122.0 |
| hypothetical protein | DWZ36_14085 | Not Available | Negative | 3307239 - 3307517 | 10801.4 |
| hypothetical protein | DWZ36_14090 | Not Available | Positive | 3307472 - 3307846 | 14330.9 |
| duf4858 domain-containing protein | DWZ36_14095 | Not Available | Negative | 3307793 - 3308563 | 29514.5 |
| bifunctional dihydroorotate dehydrogenase b nad binding subunit/nadph-dependent glutamate synthase | DWZ36_14100 | Not Available | Negative | 3308974 - 3311271 | 82893.6 |
| mfs transporter | DWZ36_14105 | Not Available | Negative | 3311454 - 3312671 | 43390.6 |
| serine--trna ligase | DWZ36_14110 | Not Available | Negative | 3312811 - 3314085 | 47884.3 |
| nicotinamide riboside transporter pnuc | DWZ36_14115 | Not Available | Positive | 3314205 - 3314777 | 22144.5 |
| thiamine diphosphokinase | DWZ36_14120 | Not Available | Positive | 3314764 - 3315399 | 23777.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

