Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase small subunit | DWZ36_13975 | Not Available | Negative | 3281293 - 3281847 | 21284.6 |
| biosynthetic-type acetolactate synthase large subunit | DWZ36_13980 | Not Available | Negative | 3281858 - 3283555 | 61841.6 |
| dihydroxy-acid dehydratase | DWZ36_13985 | Not Available | Negative | 3283655 - 3285457 | 64117.2 |
| hypothetical protein | DWZ36_13990 | Not Available | Negative | 3285868 - 3286242 | 14063.1 |
| peptidylprolyl isomerase | DWZ36_13995 | Not Available | Positive | 3286605 - 3287183 | 20999.5 |
| ragb/susd family nutrient uptake outer membrane protein | DWZ36_14000 | Not Available | Negative | 3287331 - 3288773 | 54930.9 |
| susc/raga family tonb-linked outer membrane protein | DWZ36_14005 | Not Available | Negative | 3288786 - 3292067 | 123217.0 |
| tlpa family protein disulfide reductase | DWZ36_14010 | Not Available | Negative | 3292097 - 3293437 | 51223.8 |
| putative dna modification/repair radical sam protein | DWZ36_14015 | Not Available | Positive | 3293794 - 3295062 | 48564.8 |
| dna metabolism protein | DWZ36_14020 | Not Available | Positive | 3295059 - 3295826 | 30524.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

