Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | DWZ36_13875 | Not Available | Positive | 3253203 - 3254474 | 49183.3 |
| rlob domain-containing protein | DWZ36_13880 | Not Available | Positive | 3254487 - 3255200 | 27503.6 |
| duf3375 domain-containing protein | DWZ36_13885 | Not Available | Positive | 3255320 - 3256768 | 56579.4 |
| duf4194 domain-containing protein | DWZ36_13890 | Not Available | Positive | 3256765 - 3257349 | 22409.8 |
| aaa family atpase | DWZ36_13895 | Not Available | Positive | 3257324 - 3260719 | 132229.0 |
| hypothetical protein | DWZ36_13900 | Not Available | Positive | 3260716 - 3261882 | 44987.2 |
| hypothetical protein | DWZ36_13905 | Not Available | Negative | 3262129 - 3262578 | 17049.0 |
| hypothetical protein | DWZ36_13910 | Not Available | Negative | 3262649 - 3263641 | 37676.2 |
| preprotein translocase subunit seca | DWZ36_13915 | Not Available | Negative | 3263764 - 3267060 | 125101.0 |
| alkaline phosphatase family protein | DWZ36_13920 | Not Available | Negative | 3267156 - 3268739 | 59449.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

