Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-glucosidase | DWZ36_01275 | Not Available | Negative | 313920 - 315857 | 73670.1 |
| hypothetical protein | DWZ36_01280 | Not Available | Negative | 315999 - 318635 | 98794.7 |
| serine hydrolase | DWZ36_01285 | Not Available | Negative | 318642 - 319727 | 39744.6 |
| glycoside hydrolase family 127 protein | DWZ36_01290 | Not Available | Negative | 319805 - 321727 | 73147.1 |
| glycoside hydrolase | DWZ36_01295 | Not Available | Negative | 321854 - 323239 | 52288.7 |
| hypothetical protein | DWZ36_01300 | Not Available | Negative | 323335 - 324948 | 61099.8 |
| hypothetical protein | DWZ36_01305 | Not Available | Negative | 325113 - 326045 | 35845.9 |
| endo-polygalacturonase | DWZ36_01310 | Not Available | Negative | 326236 - 327672 | 53741.4 |
| ragb/susd family nutrient uptake outer membrane protein | DWZ36_01315 | Not Available | Negative | 327872 - 329899 | 75440.1 |
| tonb-dependent receptor | DWZ36_01320 | Not Available | Negative | 329922 - 333248 | 122473.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

