Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit uvrc | DWZ36_13240 | Not Available | Negative | 3111809 - 3113629 | 69850.7 |
| hypothetical protein | DWZ36_13245 | Not Available | Positive | 3113632 - 3113856 | 8505.38 |
| adenine phosphoribosyltransferase | DWZ36_13250 | Not Available | Negative | 3113859 - 3114383 | 19189.4 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | DWZ36_13255 | Not Available | Negative | 3114443 - 3116314 | 69589.1 |
| flotillin family protein | DWZ36_13260 | Not Available | Negative | 3116461 - 3118161 | 62444.3 |
| hypothetical protein | DWZ36_13265 | Not Available | Negative | 3118187 - 3118720 | 20260.5 |
| rrna maturation rnase ybey | DWZ36_13270 | Not Available | Negative | 3118947 - 3119363 | 15837.9 |
| hypothetical protein | DWZ36_13275 | Not Available | Negative | 3119408 - 3120640 | 44161.1 |
| hypothetical protein | DWZ36_13280 | Not Available | Positive | 3121157 - 3121414 | 9707.39 |
| hypothetical protein | DWZ36_13285 | Not Available | Negative | 3121445 - 3122086 | 23400.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

