Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein muts | DWZ36_13135 | Not Available | Positive | 3089441 - 3092053 | 97940.6 |
| glycoside hydrolase | DWZ36_13140 | Not Available | Positive | 3092103 - 3094082 | 75333.0 |
| port family protein | DWZ36_13150 | Not Available | Positive | 3094290 - 3094877 | 21987.3 |
| hypothetical protein | DWZ36_13155 | Not Available | Positive | 3094920 - 3096587 | 64193.7 |
| port family protein | DWZ36_13160 | Not Available | Positive | 3096722 - 3097411 | 25264.2 |
| hypothetical protein | DWZ36_13165 | Not Available | Negative | 3097577 - 3097756 | 7092.65 |
| hypothetical protein | DWZ36_13170 | Not Available | Positive | 3097978 - 3099636 | 63793.9 |
| hypothetical protein | DWZ36_13175 | Not Available | Positive | 3099753 - 3099998 | 9220.3 |
| porin family protein | DWZ36_13180 | Not Available | Positive | 3100307 - 3101005 | 25718.4 |
| chloramphenicol acetyltransferase | DWZ36_13185 | Not Available | Negative | 3101241 - 3101897 | 25277.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

