Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide biosynthesis protein | DWZ36_13035 | Not Available | Positive | 3067590 - 3069119 | 57468.5 |
| hypothetical protein | DWZ36_13040 | Not Available | Positive | 3069104 - 3070558 | 56204.6 |
| hypothetical protein | DWZ36_13045 | Not Available | Positive | 3070524 - 3071678 | 45433.5 |
| hypothetical protein | DWZ36_13050 | Not Available | Positive | 3071689 - 3072528 | 32499.6 |
| glycosyltransferase | DWZ36_13055 | Not Available | Positive | 3072627 - 3073709 | 41471.5 |
| glycosyltransferase family 1 protein | DWZ36_13060 | Not Available | Positive | 3073725 - 3074837 | 43139.0 |
| acyltransferase | DWZ36_13065 | Not Available | Negative | 3075119 - 3076261 | 43781.8 |
| metallophosphoesterase | DWZ36_13070 | Not Available | Negative | 3076276 - 3077106 | 31429.9 |
| dha2 family efflux mfs transporter permease subunit | DWZ36_13075 | Not Available | Negative | 3077160 - 3078536 | 49031.6 |
| methionine adenosyltransferase | DWZ36_13080 | Not Available | Positive | 3078814 - 3080106 | 47598.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

