Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_12875 | Not Available | Negative | 3048766 - 3048960 | 7464.04 |
| hypothetical protein | DWZ36_12880 | Not Available | Negative | 3049392 - 3049877 | 18875.2 |
| hypothetical protein | DWZ36_12885 | Not Available | Positive | 3049893 - 3050132 | 9216.19 |
| hypothetical protein | DWZ36_12890 | Not Available | Positive | 3050144 - 3050404 | 10450.6 |
| hypothetical protein | DWZ36_12895 | Not Available | Negative | 3050334 - 3050690 | 14039.1 |
| hypothetical protein | DWZ36_12900 | Not Available | Negative | 3050866 - 3051336 | 17647.5 |
| histone h1 | DWZ36_12910 | Not Available | Positive | 3051806 - 3051979 | 6625.0 |
| hypothetical protein | DWZ36_12915 | Not Available | Negative | 3052109 - 3053551 | 53944.1 |
| recombinase | DWZ36_12920 | Not Available | Negative | 3053605 - 3055062 | 55477.1 |
| marr family transcriptional regulator | DWZ36_12925 | Not Available | Negative | 3055269 - 3056135 | 32719.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

