Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m23 family peptidase | DWZ36_12825 | Not Available | Positive | 3038690 - 3039520 | 30995.1 |
| hypothetical protein | DWZ36_12830 | Not Available | Positive | 3039544 - 3039825 | 11213.2 |
| hypothetical protein | DWZ36_12835 | Not Available | Positive | 3039840 - 3041630 | 66428.4 |
| duf1738 domain-containing protein | DWZ36_12840 | Not Available | Positive | 3041703 - 3043901 | 84343.9 |
| glucosaminidase | DWZ36_12845 | Not Available | Positive | 3043913 - 3045469 | 57478.6 |
| hypothetical protein | DWZ36_12850 | Not Available | Positive | 3045482 - 3045658 | 6671.7 |
| hypothetical protein | DWZ36_12855 | Not Available | Positive | 3045741 - 3046352 | 22990.4 |
| duf1738 domain-containing protein | DWZ36_12860 | Not Available | Positive | 3046358 - 3048040 | 64562.4 |
| hypothetical protein | DWZ36_12865 | Not Available | Negative | 3048095 - 3048466 | 13913.6 |
| hypothetical protein | DWZ36_12870 | Not Available | Negative | 3048477 - 3048761 | 11212.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

