Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| orotate phosphoribosyltransferase | DWZ36_12775 | Not Available | Positive | 3030084 - 3030920 | 32544.9 |
| m23 family peptidase | DWZ36_12780 | Not Available | Negative | 3030953 - 3031612 | 24159.7 |
| duf4099 domain-containing protein | DWZ36_12785 | Not Available | Positive | 3031834 - 3032592 | 28721.2 |
| hypothetical protein | DWZ36_12790 | Not Available | Positive | 3032613 - 3032837 | 8699.02 |
| hypothetical protein | DWZ36_12795 | Not Available | Positive | 3032863 - 3034431 | 59305.7 |
| hypothetical protein | DWZ36_12800 | Not Available | Positive | 3034436 - 3036127 | 64648.8 |
| ph domain-containing protein | DWZ36_12805 | Not Available | Positive | 3036140 - 3036625 | 18895.5 |
| hypothetical protein | DWZ36_12810 | Not Available | Positive | 3036606 - 3037301 | 25635.7 |
| hypothetical protein | DWZ36_12815 | Not Available | Positive | 3037314 - 3038000 | 26440.1 |
| hypothetical protein | DWZ36_12820 | Not Available | Positive | 3038013 - 3038657 | 21915.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

