Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | DWZ36_12725 | Not Available | Positive | 3025465 - 3026010 | 21010.2 |
| hypothetical protein | DWZ36_12730 | Not Available | Positive | 3026007 - 3026384 | 14859.8 |
| hypothetical protein | DWZ36_12735 | Not Available | Positive | 3026809 - 3027009 | 7662.31 |
| deaminase | DWZ36_12740 | Not Available | Positive | 3027189 - 3027674 | 17483.0 |
| hypothetical protein | DWZ36_12745 | Not Available | Negative | 3027727 - 3027903 | 6585.39 |
| duf1273 family protein | DWZ36_12750 | Not Available | Negative | 3028016 - 3028519 | 18856.8 |
| ribonucleotide-diphosphate reductase subunit alpha | DWZ36_12755 | Not Available | Negative | 3028521 - 3029087 | 21405.5 |
| hypothetical protein | DWZ36_12760 | Not Available | Negative | 3029380 - 3029547 | 6396.83 |
| hypothetical protein | DWZ36_12765 | Not Available | Negative | 3029548 - 3029778 | 8466.35 |
| hypothetical protein | DWZ36_12770 | Not Available | Positive | 3029792 - 3029950 | 6423.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

