Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s2 | DWZ36_12260 | Not Available | Negative | 2923918 - 2924757 | 30564.9 |
| 30s ribosomal protein s9 | DWZ36_12265 | Not Available | Negative | 2924890 - 2925276 | 14527.7 |
| 50s ribosomal protein l13 | DWZ36_12270 | Not Available | Negative | 2925283 - 2925744 | 17129.7 |
| glycosyltransferase family 4 protein | DWZ36_12275 | Not Available | Positive | 2925993 - 2926740 | 28463.1 |
| glycosyltransferase family 4 protein | DWZ36_12280 | Not Available | Positive | 2926737 - 2927888 | 44626.9 |
| glycosyltransferase family 1 protein | DWZ36_12285 | Not Available | Positive | 2927885 - 2929018 | 43539.6 |
| glycosyltransferase family 4 protein | DWZ36_12290 | Not Available | Positive | 2928979 - 2930178 | 46021.9 |
| sam-dependent methyltransferase | DWZ36_12295 | Not Available | Positive | 2930175 - 2930957 | 31205.3 |
| glycosyltransferase family 2 protein | DWZ36_12300 | Not Available | Positive | 2930941 - 2931783 | 32124.5 |
| glycosyltransferase family 1 protein | DWZ36_12305 | Not Available | Positive | 2931790 - 2932908 | 42701.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

