Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna methyltransferase | DWZ36_12010 | Not Available | Negative | 2869642 - 2870397 | 27941.9 |
| hypothetical protein | DWZ36_12015 | Not Available | Positive | 2870499 - 2872823 | 88948.3 |
| hypothetical protein | DWZ36_12020 | Not Available | Positive | 2872840 - 2873088 | 9624.58 |
| hypothetical protein | DWZ36_12025 | Not Available | Positive | 2873141 - 2873725 | 21939.4 |
| hypothetical protein | DWZ36_12030 | Not Available | Positive | 2874187 - 2874405 | 8572.49 |
| mfs transporter | DWZ36_12035 | Not Available | Negative | 2874529 - 2875917 | 51163.3 |
| duf3332 domain-containing protein | DWZ36_12040 | Not Available | Positive | 2876091 - 2876642 | 19885.5 |
| duf4934 domain-containing protein | DWZ36_12045 | Not Available | Positive | 2876721 - 2877953 | 46096.8 |
| tolc family protein | DWZ36_12050 | Not Available | Negative | 2878034 - 2879407 | 50301.9 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | DWZ36_12055 | Not Available | Negative | 2879404 - 2882619 | 117313.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

