Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_11810 | Not Available | Negative | 2825747 - 2826031 | 11091.2 |
| hypothetical protein | DWZ36_11815 | Not Available | Positive | 2826216 - 2826857 | 23631.5 |
| hnh endonuclease | DWZ36_11820 | Not Available | Positive | 2826865 - 2827515 | 24806.1 |
| hypothetical protein | DWZ36_11825 | Not Available | Positive | 2827515 - 2827694 | 7045.42 |
| hypothetical protein | DWZ36_11830 | Not Available | Positive | 2827731 - 2828300 | 22281.6 |
| hypothetical protein | DWZ36_11835 | Not Available | Positive | 2828303 - 2829106 | 31715.8 |
| hypothetical protein | DWZ36_11840 | Not Available | Positive | 2829254 - 2830024 | 29901.7 |
| hypothetical protein | DWZ36_11845 | Not Available | Positive | 2830609 - 2830851 | 8924.15 |
| duf4286 family protein | DWZ36_11850 | Not Available | Positive | 2831392 - 2831697 | 11955.4 |
| crossover junction endodeoxyribonuclease ruvc | DWZ36_11855 | Not Available | Positive | 2831694 - 2832263 | 21117.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

