Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase | DWZ36_11635 | Not Available | Positive | 2793480 - 2794289 | 31104.5 |
| slatt domain-containing protein | DWZ36_11640 | Not Available | Positive | 2794295 - 2794855 | 21476.1 |
| serine/threonine protein phosphatase | DWZ36_11645 | Not Available | Positive | 2794890 - 2795696 | 31645.7 |
| hypothetical protein | DWZ36_11650 | Not Available | Positive | 2795914 - 2796180 | 10267.6 |
| gnat family n-acetyltransferase | DWZ36_11660 | Not Available | Positive | 2797059 - 2798000 | 36081.8 |
| maoc family dehydratase | DWZ36_11665 | Not Available | Negative | 2798191 - 2798655 | 17703.5 |
| nitrous oxide-stimulated promoter family protein | DWZ36_11670 | Not Available | Positive | 2798753 - 2799046 | 11961.9 |
| hypothetical protein | DWZ36_11680 | Not Available | Negative | 2799356 - 2799829 | 18360.6 |
| hypothetical protein | DWZ36_11690 | Not Available | Negative | 2800040 - 2800246 | 7792.68 |
| hypothetical protein | DWZ36_11695 | Not Available | Negative | 2800262 - 2800453 | 7530.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

