Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_11585 | Not Available | Positive | 2782287 - 2782685 | 15862.9 |
| hypothetical protein | DWZ36_11590 | Not Available | Negative | 2782614 - 2783474 | 33048.9 |
| integrase | DWZ36_11595 | Not Available | Positive | 2783537 - 2784529 | 38114.1 |
| dna damage-inducible protein d | DWZ36_11600 | Not Available | Positive | 2784599 - 2785480 | 33781.1 |
| restriction endonuclease subunit s | DWZ36_11605 | Not Available | Positive | 2785477 - 2786769 | 48562.9 |
| hypothetical protein | DWZ36_11610 | Not Available | Negative | 2786693 - 2787247 | 21257.6 |
| cell filamentation protein fic | DWZ36_11615 | Not Available | Negative | 2787292 - 2788293 | 38808.1 |
| sam-dependent dna methyltransferase | DWZ36_11620 | Not Available | Negative | 2788286 - 2789947 | 62218.7 |
| type i restriction endonuclease subunit r | DWZ36_11625 | Not Available | Negative | 2789953 - 2793183 | 125125.0 |
| xre family transcriptional regulator | DWZ36_11630 | Not Available | Negative | 2793185 - 2793388 | 7688.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

