Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | DWZ36_11535 | Not Available | Positive | 2772626 - 2773732 | 42939.0 |
| lipofamily protein | DWZ36_11540 | Not Available | Positive | 2773741 - 2774100 | 13460.3 |
| mobilization protein | DWZ36_11545 | Not Available | Positive | 2774283 - 2775170 | 33620.6 |
| hypothetical protein | DWZ36_11550 | Not Available | Negative | 2775409 - 2776533 | 43677.6 |
| duf3800 domain-containing protein | DWZ36_11555 | Not Available | Negative | 2776536 - 2777615 | 41686.0 |
| dna-binding protein | DWZ36_11560 | Not Available | Positive | 2777963 - 2778331 | 14172.4 |
| duf3987 domain-containing protein | DWZ36_11565 | Not Available | Positive | 2778340 - 2779716 | 52876.2 |
| hypothetical protein | DWZ36_11570 | Not Available | Positive | 2779795 - 2780874 | 41340.3 |
| plasmid mobilization relaxosome protein mobc | DWZ36_11575 | Not Available | Positive | 2781012 - 2781320 | 12011.4 |
| mobilization protein | DWZ36_11580 | Not Available | Positive | 2781310 - 2782251 | 35889.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

