Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hybrid sensor histidine kinase/response regulator | DWZ36_01075 | Not Available | Positive | 258958 - 262974 | 154442.0 |
| chromate transporter | DWZ36_01080 | Not Available | Positive | 262979 - 263527 | 20451.8 |
| chromate transporter | DWZ36_01085 | Not Available | Positive | 263524 - 264096 | 21054.4 |
| hypothetical protein | DWZ36_01090 | Not Available | Negative | 264383 - 265882 | 58057.4 |
| excinuclease abc subunit uvra | DWZ36_01095 | Not Available | Positive | 265964 - 268765 | 104890.0 |
| endonuclease/exonuclease/phosphatase family protein | DWZ36_01100 | Not Available | Positive | 269011 - 270042 | 39607.7 |
| beta-n-acetylhexosaminidase | DWZ36_01105 | Not Available | Positive | 270098 - 272404 | 85852.1 |
| hypothetical protein | DWZ36_01110 | Not Available | Negative | 272514 - 273005 | 17887.6 |
| hypothetical protein | DWZ36_01115 | Not Available | Negative | 273024 - 273245 | 8706.9 |
| carbon starvation protein a | DWZ36_01120 | Not Available | Negative | 273232 - 274662 | 52225.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

