Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_11330 | Not Available | Positive | 2717908 - 2718123 | 8138.21 |
| plasmid pria4b orf-3 family protein | DWZ36_11335 | Not Available | Negative | 2718238 - 2719797 | 61141.4 |
| hypothetical protein | DWZ36_11340 | Not Available | Negative | 2719977 - 2720312 | 12878.8 |
| thioredoxin | DWZ36_11345 | Not Available | Negative | 2720348 - 2720662 | 11454.8 |
| dna polymerase iii subunit alpha | DWZ36_11350 | Not Available | Negative | 2720704 - 2724501 | 143977.0 |
| phosphatidylserine decarboxylase proenzyme | DWZ36_11355 | Not Available | Positive | 2724693 - 2725379 | 25956.1 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | DWZ36_11360 | Not Available | Positive | 2725391 - 2726098 | 26073.4 |
| duf4834 family protein | DWZ36_11365 | Not Available | Positive | 2726151 - 2726453 | 11541.5 |
| nucleoside deaminase | DWZ36_11370 | Not Available | Negative | 2726457 - 2726891 | 15697.1 |
| hypothetical protein | DWZ36_11375 | Not Available | Negative | 2726893 - 2727126 | 9401.63 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

