Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding protein | DWZ36_11225 | Not Available | Negative | 2692451 - 2694094 | 60732.8 |
| duf1847 domain-containing protein | DWZ36_11230 | Not Available | Negative | 2694100 - 2694750 | 24388.4 |
| dna repair protein rada | DWZ36_11235 | Not Available | Negative | 2694790 - 2696157 | 49876.4 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | DWZ36_11240 | Not Available | Positive | 2696685 - 2699117 | 88655.7 |
| cofactor-independent phosphoglycerate mutase | DWZ36_11245 | Not Available | Positive | 2699122 - 2700333 | 44610.5 |
| threonine synthase | DWZ36_11250 | Not Available | Positive | 2700424 - 2701725 | 47728.8 |
| abc transporter atp-binding protein | DWZ36_11260 | Not Available | Negative | 2702320 - 2703327 | 37084.8 |
| iron abc transporter permease | DWZ36_11265 | Not Available | Negative | 2703327 - 2704358 | 36065.6 |
| abc transporter substrate-binding protein | DWZ36_11270 | Not Available | Negative | 2704474 - 2705610 | 42164.2 |
| hypothetical protein | DWZ36_11275 | Not Available | Negative | 2705614 - 2706702 | 41380.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

