Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DWZ36_10930 | Not Available | Positive | 2595126 - 2596214 | 40613.5 |
| hypothetical protein | DWZ36_10935 | Not Available | Positive | 2596226 - 2597035 | 30808.8 |
| atp-dependent helicase | DWZ36_10940 | Not Available | Positive | 2597046 - 2597836 | 30228.4 |
| hybrid sensor histidine kinase/response regulator | DWZ36_10950 | Not Available | Positive | 2598767 - 2603089 | 165150.0 |
| glycoside hydrolase family 28 protein | DWZ36_10955 | Not Available | Positive | 2603169 - 2604560 | 52677.8 |
| alpha/beta hydrolase | DWZ36_10960 | Not Available | Positive | 2604565 - 2605494 | 33742.8 |
| glycoside hydrolase family 95 protein | DWZ36_10965 | Not Available | Positive | 2605531 - 2607999 | 92161.6 |
| hypothetical protein | DWZ36_10975 | Not Available | Positive | 2610729 - 2611022 | 10698.8 |
| pectin esterase | DWZ36_10980 | Not Available | Positive | 2611190 - 2612521 | 49814.2 |
| tonb-dependent receptor | DWZ36_10985 | Not Available | Positive | 2612653 - 2615640 | 110671.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

