Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_10880 | Not Available | Positive | 2586462 - 2586908 | 16817.7 |
| hypothetical protein | DWZ36_10885 | Not Available | Positive | 2586948 - 2587163 | 8289.14 |
| 4fe-4s dicluster domain-containing protein | DWZ36_10890 | Not Available | Positive | 2587185 - 2588375 | 45012.0 |
| polysaccharide pyruvyl transferase family protein | DWZ36_10895 | Not Available | Positive | 2588395 - 2589501 | 42317.9 |
| glycosyltransferase | DWZ36_10900 | Not Available | Positive | 2589603 - 2590781 | 44771.2 |
| radical sam protein | DWZ36_10905 | Not Available | Positive | 2590798 - 2591871 | 41050.6 |
| hypothetical protein | DWZ36_10910 | Not Available | Positive | 2591876 - 2592172 | 11232.3 |
| hypothetical protein | DWZ36_10915 | Not Available | Positive | 2592205 - 2592873 | 26131.2 |
| atp-binding protein | DWZ36_10920 | Not Available | Positive | 2593082 - 2594302 | 46338.8 |
| rlob domain-containing protein | DWZ36_10925 | Not Available | Positive | 2594306 - 2594941 | 24332.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

