Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | DWZ36_10830 | Not Available | Positive | 2575595 - 2576578 | 38158.0 |
| hypothetical protein | DWZ36_10835 | Not Available | Positive | 2576613 - 2577272 | 24766.2 |
| hypothetical protein | DWZ36_10840 | Not Available | Positive | 2577308 - 2578777 | 54552.3 |
| atp-grasp domain-containing protein | DWZ36_10845 | Not Available | Positive | 2578767 - 2579930 | 45405.8 |
| hypothetical protein | DWZ36_10850 | Not Available | Positive | 2579932 - 2580816 | 33966.7 |
| glycosyltransferase | DWZ36_10855 | Not Available | Positive | 2580833 - 2581957 | 42085.0 |
| n-acetylmuramoyl-l-alanine amidase | DWZ36_10860 | Not Available | Negative | 2582187 - 2582792 | 23255.8 |
| dna-binding protein | DWZ36_10865 | Not Available | Negative | 2582890 - 2583396 | 18460.0 |
| duf4248 domain-containing protein | DWZ36_10870 | Not Available | Negative | 2583683 - 2583889 | 7792.31 |
| hypothetical protein | DWZ36_10875 | Not Available | Negative | 2584069 - 2586333 | 86751.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

