Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DWZ36_01025 | Not Available | Positive | 245574 - 246572 | 38380.6 |
| hypothetical protein | DWZ36_01030 | Not Available | Negative | 247310 - 248389 | 40319.9 |
| duf108 domain-containing protein | DWZ36_01035 | Not Available | Positive | 248686 - 249474 | 28162.8 |
| dihydrofolate reductase | DWZ36_01040 | Not Available | Negative | 249457 - 250341 | 32605.2 |
| molecular chaperone djla | DWZ36_01045 | Not Available | Positive | 250448 - 251230 | 29022.9 |
| peptide chain release factor 3 | DWZ36_01050 | Not Available | Negative | 251305 - 252873 | 59982.5 |
| dtdp-4-dehydrorhamnose reductase | DWZ36_01055 | Not Available | Negative | 252880 - 253737 | 32010.2 |
| duf4924 family protein | DWZ36_01060 | Not Available | Negative | 253752 - 254294 | 21340.1 |
| lyse family translocator | DWZ36_01065 | Not Available | Negative | 254366 - 255025 | 24319.7 |
| phosphoribosylformylglycinamidine synthase | DWZ36_01070 | Not Available | Positive | 255176 - 258880 | 137107.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

