Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 2552959 - 2553042 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2553055 - 2553127 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2553137 - 2553208 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2553256 - 2553339 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2553352 - 2553427 | Not Available |
| glutamine synthetase | DWZ36_10750 | Not Available | Negative | 2553548 - 2555050 | 56034.0 |
| gnat family n-acetyltransferase | DWZ36_10755 | Not Available | Positive | 2555256 - 2556788 | 59325.0 |
| pas domain-containing protein | DWZ36_10760 | Not Available | Negative | 2556915 - 2558237 | 50256.6 |
| sigma-54-dependent fis family transcriptional regulator | DWZ36_10765 | Not Available | Negative | 2558243 - 2559574 | 50256.9 |
| tolc family protein | DWZ36_10770 | Not Available | Positive | 2559906 - 2561213 | 50704.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

