Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiazole synthase | DWZ36_10675 | Not Available | Negative | 2546036 - 2546809 | 27537.5 |
| thiamine phosphate synthase | DWZ36_10680 | Not Available | Negative | 2546827 - 2547453 | 23079.1 |
| sulfur carrier protein this | DWZ36_10685 | Not Available | Negative | 2547443 - 2547643 | 7139.79 |
| superoxide dismutase | DWZ36_10690 | Not Available | Negative | 2548029 - 2548646 | 23358.6 |
| atp-dependent dna helicase | DWZ36_10695 | Not Available | Positive | 2548755 - 2551145 | 91560.8 |
| carboxynorspermidine decarboxylase | DWZ36_10700 | Not Available | Positive | 2551178 - 2552341 | 44380.1 |
| Trna-gly | Not Available | Not Available | Positive | 2552515 - 2552587 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2552635 - 2552718 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2552739 - 2552825 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2552839 - 2552911 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

