Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mobilization protein | DWZ36_10620 | Not Available | Positive | 2536114 - 2537184 | 40524.2 |
| ribose-phosphate pyrophosphokinase | DWZ36_10630 | Not Available | Negative | 2537697 - 2538635 | 34190.5 |
| thiamine phosphate synthase | DWZ36_10635 | Not Available | Negative | 2538800 - 2539408 | 22934.7 |
| hypothetical protein | DWZ36_10640 | Not Available | Positive | 2539628 - 2539981 | 12947.3 |
| glutathionylspermidine synthase family protein | DWZ36_10645 | Not Available | Positive | 2539994 - 2541118 | 43031.6 |
| hesa/moeb/thif family protein | DWZ36_10650 | Not Available | Negative | 2541231 - 2541923 | 25388.8 |
| 2-iminoacetate synthase thih | DWZ36_10655 | Not Available | Negative | 2542002 - 2543132 | 43251.8 |
| flavodoxin family protein | DWZ36_10660 | Not Available | Negative | 2543218 - 2543790 | 21314.5 |
| hypothetical protein | DWZ36_10665 | Not Available | Negative | 2543790 - 2544305 | 19574.8 |
| phosphomethylpyrimidine synthase thic | DWZ36_10670 | Not Available | Negative | 2544327 - 2546027 | 63476.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

