Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DWZ36_10570 | Not Available | Negative | 2522079 - 2522342 | 10126.5 |
| hypothetical protein | DWZ36_10575 | Not Available | Negative | 2522902 - 2526570 | 143696.0 |
| histidine-type phosphatase | DWZ36_10580 | Not Available | Positive | 2526960 - 2528237 | 49222.7 |
| hypothetical protein | DWZ36_10585 | Not Available | Negative | 2528627 - 2528875 | 9593.04 |
| tetracycline resistance element regulator rteb | DWZ36_10590 | Not Available | Positive | 2529134 - 2529292 | 6006.21 |
| hypothetical protein | DWZ36_10595 | Not Available | Positive | 2529703 - 2531091 | 54580.1 |
| site-specific integrase | DWZ36_10600 | Not Available | Negative | 2531602 - 2532825 | 47661.4 |
| site-specific integrase | DWZ36_10605 | Not Available | Positive | 2533238 - 2534530 | 50312.2 |
| hypothetical protein | DWZ36_10610 | Not Available | Positive | 2534544 - 2535572 | 40375.0 |
| duf3853 family protein | DWZ36_10615 | Not Available | Positive | 2535794 - 2536102 | 11198.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

