Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mobilization protein | DWZ36_10520 | Not Available | Positive | 2507610 - 2508794 | 45455.0 |
| conjugal transfer protein trag | DWZ36_10525 | Not Available | Positive | 2508842 - 2509117 | 10631.1 |
| mobilization protein | DWZ36_10530 | Not Available | Positive | 2509175 - 2510851 | 63195.9 |
| hypothetical protein | DWZ36_10535 | Not Available | Negative | 2510969 - 2514124 | 123476.0 |
| duf3945 domain-containing protein | DWZ36_10540 | Not Available | Positive | 2514422 - 2515717 | 48891.6 |
| duf1896 domain-containing protein | DWZ36_10545 | Not Available | Positive | 2515822 - 2516265 | 17004.9 |
| hypothetical protein | DWZ36_10550 | Not Available | Negative | 2516231 - 2516476 | 9654.97 |
| dna methylase | DWZ36_10555 | Not Available | Positive | 2516588 - 2520550 | 151970.0 |
| hypothetical protein | DWZ36_10560 | Not Available | Positive | 2520632 - 2521642 | 37700.8 |
| hypothetical protein | DWZ36_10565 | Not Available | Negative | 2521753 - 2522082 | 12644.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

