Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_10460 | Not Available | Negative | 2499286 - 2499504 | 8386.03 |
| is21 family transposase | DWZ36_10465 | Not Available | Positive | 2500036 - 2501610 | 62021.2 |
| atp-binding protein | DWZ36_10470 | Not Available | Positive | 2501607 - 2502389 | 30411.1 |
| hypothetical protein | DWZ36_10480 | Not Available | Negative | 2502936 - 2503364 | 17071.8 |
| hypothetical protein | DWZ36_10485 | Not Available | Negative | 2503386 - 2503841 | 17375.7 |
| hypothetical protein | DWZ36_10490 | Not Available | Negative | 2504167 - 2505078 | 33500.4 |
| duf3408 domain-containing protein | DWZ36_10495 | Not Available | Negative | 2505082 - 2505510 | 16183.3 |
| para family protein | DWZ36_10500 | Not Available | Negative | 2505513 - 2505950 | 16199.9 |
| conjugal transfer protein | DWZ36_10505 | Not Available | Negative | 2505987 - 2506127 | 5211.46 |
| hypothetical protein | DWZ36_10515 | Not Available | Negative | 2507111 - 2507479 | 14128.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

