Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4848 domain-containing protein | DWZ36_10410 | Not Available | Negative | 2491074 - 2491916 | 31683.8 |
| hypothetical protein | DWZ36_10415 | Not Available | Negative | 2491943 - 2492569 | 22967.5 |
| duf4249 domain-containing protein | DWZ36_10420 | Not Available | Negative | 2492591 - 2493562 | 36422.8 |
| tonb-dependent receptor | DWZ36_10425 | Not Available | Negative | 2493567 - 2496131 | 97227.9 |
| duf4974 domain-containing protein | DWZ36_10430 | Not Available | Negative | 2496128 - 2496931 | 30536.1 |
| rna polymerase sigma-70 factor | DWZ36_10435 | Not Available | Negative | 2497003 - 2497518 | 20121.7 |
| hypothetical protein | DWZ36_10440 | Not Available | Positive | 2497701 - 2498000 | 11274.8 |
| xre family transcriptional regulator | DWZ36_10445 | Not Available | Negative | 2498336 - 2498551 | 7991.84 |
| hypothetical protein | DWZ36_10450 | Not Available | Negative | 2498532 - 2498828 | 11631.5 |
| hypothetical protein | DWZ36_10455 | Not Available | Negative | 2498839 - 2499249 | 15694.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

