Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DWZ36_10355 | Not Available | Negative | 2479830 - 2483126 | 120991.0 |
| fecr family protein | DWZ36_10360 | Not Available | Negative | 2483228 - 2484262 | 40100.8 |
| rna polymerase sigma-70 factor | DWZ36_10365 | Not Available | Negative | 2484308 - 2484868 | 21746.7 |
| hypothetical protein | DWZ36_10370 | Not Available | Negative | 2485070 - 2485312 | 9335.66 |
| type iv secretory system conjugative dna transfer family protein | DWZ36_10375 | Not Available | Negative | 2485457 - 2486362 | 34014.5 |
| hypothetical protein | DWZ36_10380 | Not Available | Negative | 2486362 - 2487084 | 27239.2 |
| mobilization protein | DWZ36_10385 | Not Available | Negative | 2487093 - 2488028 | 36589.0 |
| hypothetical protein | DWZ36_10390 | Not Available | Negative | 2488040 - 2488657 | 24166.8 |
| hypothetical protein | DWZ36_10395 | Not Available | Negative | 2488744 - 2489247 | 19154.3 |
| hypothetical protein | DWZ36_10405 | Not Available | Negative | 2490217 - 2490984 | 28423.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

