Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix domain-containing protein | DWZ36_10305 | Not Available | Negative | 2471026 - 2471550 | 19841.6 |
| hlyc/corc family transporter | DWZ36_10310 | Not Available | Positive | 2471685 - 2472971 | 48001.9 |
| hypothetical protein | DWZ36_10315 | Not Available | Positive | 2472994 - 2473377 | 15190.0 |
| asnc family transcriptional regulator | DWZ36_10320 | Not Available | Positive | 2473494 - 2473952 | 17087.9 |
| duf4491 family protein | DWZ36_10325 | Not Available | Positive | 2473959 - 2474273 | 12155.1 |
| hypothetical protein | DWZ36_10330 | Not Available | Negative | 2474473 - 2474916 | 17109.1 |
| hypothetical protein | DWZ36_10335 | Not Available | Positive | 2474942 - 2475670 | 28594.2 |
| hypothetical protein | DWZ36_10340 | Not Available | Positive | 2475613 - 2475921 | 12084.6 |
| arylsulfatase | DWZ36_10345 | Not Available | Negative | 2476543 - 2478111 | 57992.8 |
| ragb/susd family nutrient uptake outer membrane protein | DWZ36_10350 | Not Available | Negative | 2478193 - 2479833 | 62901.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

