Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | DWZ36_00970 | Not Available | Negative | 230672 - 232159 | 56925.7 |
| acrb/acrd/acrf family protein | DWZ36_00975 | Not Available | Negative | 232146 - 235226 | 115372.0 |
| efflux rnd transporter periplasmic adaptor subunit | DWZ36_00980 | Not Available | Negative | 235231 - 236298 | 39187.2 |
| o-antigen ligase domain-containing protein | DWZ36_00985 | Not Available | Negative | 236351 - 238003 | 62023.4 |
| transglutaminase domain-containing protein | DWZ36_00990 | Not Available | Negative | 238006 - 239517 | 58282.2 |
| signal peptidase i | DWZ36_00995 | Not Available | Negative | 239519 - 240421 | 35333.0 |
| hypothetical protein | DWZ36_01000 | Not Available | Negative | 240430 - 242334 | 73726.7 |
| 6-bladed beta-propeller | DWZ36_01005 | Not Available | Negative | 242614 - 243708 | 41967.5 |
| hypothetical protein | DWZ36_01010 | Not Available | Negative | 243797 - 244045 | 9017.95 |
| hypothetical protein | DWZ36_01020 | Not Available | Negative | 245099 - 245320 | 7881.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

