Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_10155 | Not Available | Negative | 2436396 - 2436581 | 6804.4 |
| hypothetical protein | DWZ36_10160 | Not Available | Positive | 2436580 - 2436786 | 7939.36 |
| cysteine desulfurase | DWZ36_10165 | Not Available | Negative | 2436862 - 2438076 | 45098.1 |
| fe-s cluster assembly protein sufd | DWZ36_10170 | Not Available | Negative | 2438083 - 2439426 | 50473.4 |
| fe-s cluster assembly atpase sufc | DWZ36_10175 | Not Available | Negative | 2439456 - 2440208 | 27654.6 |
| fe-s cluster assembly protein sufb | DWZ36_10180 | Not Available | Negative | 2440236 - 2441687 | 54039.0 |
| cvpa family protein | DWZ36_10185 | Not Available | Negative | 2441695 - 2442198 | 18078.1 |
| translation initiation factor if-2 | DWZ36_10190 | Not Available | Negative | 2442337 - 2445348 | 111115.0 |
| transcription termination/antitermination protein nusa | DWZ36_10195 | Not Available | Negative | 2445390 - 2446646 | 47697.0 |
| ribosome maturation factor rimp | DWZ36_10200 | Not Available | Negative | 2446649 - 2447116 | 17916.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

