Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase | DWZ36_10045 | Not Available | Positive | 2405952 - 2407499 | 56930.6 |
| crp/fnr family transcriptional regulator | DWZ36_10050 | Not Available | Negative | 2407784 - 2408374 | 21991.1 |
| hydroxylamine reductase | DWZ36_10055 | Not Available | Positive | 2408489 - 2410147 | 61176.4 |
| iron-sulfur cluster repair di-iron protein | DWZ36_10060 | Not Available | Positive | 2410159 - 2410890 | 27895.2 |
| glycoside hydrolase family 95 protein | DWZ36_10065 | Not Available | Negative | 2410970 - 2413429 | 91873.4 |
| hypothetical protein | DWZ36_10075 | Not Available | Negative | 2414342 - 2415529 | 44355.6 |
| duf3109 family protein | DWZ36_10080 | Not Available | Negative | 2415596 - 2416177 | 22097.6 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | DWZ36_10085 | Not Available | Negative | 2416280 - 2417794 | 55852.0 |
| gntr family transcriptional regulator | DWZ36_10095 | Not Available | Positive | 2418244 - 2419224 | 38069.7 |
| l-fucose isomerase | DWZ36_10100 | Not Available | Positive | 2419246 - 2421021 | 65624.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

